STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY95239.1Hypothetical protein. (562 aa)    
Predicted Functional Partners:
SDY95212.1
TolA-binding protein.
 
    0.881
SDY95340.1
Hypothetical protein.
 
 
   0.828
SDY22536.1
Hypothetical protein.
  
     0.745
SDY52442.1
Hypothetical protein.
  
     0.744
SDX47577.1
Hypothetical protein.
  
     0.743
SDX94684.1
Family of unknown function.
  
     0.743
SDY90449.1
Hypothetical protein.
  
 
   0.740
SDX43746.1
Putative porin.
  
     0.733
SDY49451.1
Hypothetical protein.
  
     0.733
SDX92357.1
Hypothetical protein.
  
     0.732
Your Current Organism:
Hymenobacter psychrophilus
NCBI taxonomy Id: 651662
Other names: CGMCC 1.8975, DSM 22290, H. psychrophilus, Hymenobacter psychrophilus Zhang et al. 2011, Hymenobacter sp. BZ33r, LMG 25548, LMG:25548, strain BZ33r
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.