STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY98131.1Phage portal protein, HK97 family. (432 aa)    
Predicted Functional Partners:
SDY97690.1
Phage major capsid protein, HK97 family.
 
 
 
 0.879
SDY97708.1
Phage prohead protease, HK97 family.
 
   
 0.822
SDX44838.1
ADP-ribosylglycohydrolase.
    
   0.813
SDY66898.1
Protein of unknown function.
    
   0.813
SDX93998.1
Hypothetical protein.
   
   0.804
SDY98112.1
Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein.
  
    0.801
SDY98152.1
Phage Mu protein F like protein.
       0.795
SDX90797.1
Hypothetical protein.
    
   0.790
SDY98095.1
Hypothetical protein.
       0.774
SDY20589.1
Microcystin-dependent protein.
   
   0.601
Your Current Organism:
Hymenobacter psychrophilus
NCBI taxonomy Id: 651662
Other names: CGMCC 1.8975, DSM 22290, H. psychrophilus, Hymenobacter psychrophilus Zhang et al. 2011, Hymenobacter sp. BZ33r, LMG 25548, LMG:25548, strain BZ33r
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.