Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR90870.1 | SDR90977.1 | SAMN04490182_0276 | SAMN04490182_0279 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.678 |
SDR90870.1 | SDR91025.1 | SAMN04490182_0276 | SAMN04490182_0280 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.905 |
SDR90870.1 | SDR91059.1 | SAMN04490182_0276 | SAMN04490182_0281 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.928 |
SDR90870.1 | SDS40208.1 | SAMN04490182_0276 | SAMN04490182_1455 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.764 |
SDR90870.1 | SDT49180.1 | SAMN04490182_0276 | SAMN04490182_4956 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily; Manually curated; Belongs to the sigma-70 factor family. ECF subfamily. | 0.909 |
SDR90977.1 | SDR90870.1 | SAMN04490182_0279 | SAMN04490182_0276 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.678 |
SDR90977.1 | SDR91025.1 | SAMN04490182_0279 | SAMN04490182_0280 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.838 |
SDR90977.1 | SDR91059.1 | SAMN04490182_0279 | SAMN04490182_0281 | Protein of unknown function. | FecR family protein. | 0.866 |
SDR91025.1 | SDR90870.1 | SAMN04490182_0280 | SAMN04490182_0276 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.905 |
SDR91025.1 | SDR90977.1 | SAMN04490182_0280 | SAMN04490182_0279 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.838 |
SDR91025.1 | SDR91059.1 | SAMN04490182_0280 | SAMN04490182_0281 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.964 |
SDR91059.1 | SDR90870.1 | SAMN04490182_0281 | SAMN04490182_0276 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.928 |
SDR91059.1 | SDR90977.1 | SAMN04490182_0281 | SAMN04490182_0279 | FecR family protein. | Protein of unknown function. | 0.866 |
SDR91059.1 | SDR91025.1 | SAMN04490182_0281 | SAMN04490182_0280 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.964 |
SDR91059.1 | SDS24720.1 | SAMN04490182_0281 | SAMN04490182_1088 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.846 |
SDR91059.1 | SDS40208.1 | SAMN04490182_0281 | SAMN04490182_1455 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.846 |
SDR91059.1 | SDS54805.1 | SAMN04490182_0281 | SAMN04490182_1796 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.846 |
SDR91059.1 | SDS94174.1 | SAMN04490182_0281 | SAMN04490182_2823 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.847 |
SDR91059.1 | SDT01799.1 | SAMN04490182_0281 | SAMN04490182_3042 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.847 |
SDR91059.1 | SDT43359.1 | SAMN04490182_0281 | SAMN04490182_4620 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.846 |
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