Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDT52801.1 | arcA | SAMN04490182_5202 | SAMN04490182_4136 | Acetylornithine deacetylase. | Arginine deiminase. | 0.908 |
SDT52801.1 | argA | SAMN04490182_5202 | SAMN04490182_5201 | Acetylornithine deacetylase. | N-acetylglutamate synthase. | 0.921 |
SDT52801.1 | argB | SAMN04490182_5202 | SAMN04490182_5321 | Acetylornithine deacetylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.757 |
SDT52801.1 | argF | SAMN04490182_5202 | SAMN04490182_0375 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.980 |
SDT52801.1 | argG | SAMN04490182_5202 | SAMN04490182_0384 | Acetylornithine deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.985 |
SDT52801.1 | argJ | SAMN04490182_5202 | SAMN04490182_4183 | Acetylornithine deacetylase. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.956 |
SDT52801.1 | carB | SAMN04490182_5202 | SAMN04490182_4515 | Acetylornithine deacetylase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.412 |
arcA | SDT52801.1 | SAMN04490182_4136 | SAMN04490182_5202 | Arginine deiminase. | Acetylornithine deacetylase. | 0.908 |
arcA | arcC | SAMN04490182_4136 | SAMN04490182_4138 | Arginine deiminase. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.993 |
arcA | argA | SAMN04490182_4136 | SAMN04490182_5201 | Arginine deiminase. | N-acetylglutamate synthase. | 0.558 |
arcA | argF | SAMN04490182_4136 | SAMN04490182_0375 | Arginine deiminase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.993 |
arcA | argG | SAMN04490182_4136 | SAMN04490182_0384 | Arginine deiminase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.922 |
arcC | arcA | SAMN04490182_4138 | SAMN04490182_4136 | Carbamate kinase; Belongs to the carbamate kinase family. | Arginine deiminase. | 0.993 |
arcC | argA | SAMN04490182_4138 | SAMN04490182_5201 | Carbamate kinase; Belongs to the carbamate kinase family. | N-acetylglutamate synthase. | 0.442 |
arcC | argF | SAMN04490182_4138 | SAMN04490182_0375 | Carbamate kinase; Belongs to the carbamate kinase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.993 |
arcC | carA | SAMN04490182_4138 | SAMN04490182_4516 | Carbamate kinase; Belongs to the carbamate kinase family. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.859 |
arcC | carB | SAMN04490182_4138 | SAMN04490182_4515 | Carbamate kinase; Belongs to the carbamate kinase family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.859 |
arcC | pyrB | SAMN04490182_4138 | SAMN04490182_5085 | Carbamate kinase; Belongs to the carbamate kinase family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.903 |
argA | SDT52801.1 | SAMN04490182_5201 | SAMN04490182_5202 | N-acetylglutamate synthase. | Acetylornithine deacetylase. | 0.921 |
argA | arcA | SAMN04490182_5201 | SAMN04490182_4136 | N-acetylglutamate synthase. | Arginine deiminase. | 0.558 |
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