STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS06695.1Methyl-accepting chemotaxis protein. (540 aa)    
Predicted Functional Partners:
SDR97712.1
Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE.
 
 0.985
SDS58045.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.984
SDT50942.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
 0.975
SDS57297.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.971
SDT21289.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.971
SDR87762.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.968
SDT21114.1
CheW protein.
 
 0.966
SDS57217.1
Purine-binding chemotaxis protein CheW.
 
 0.965
SDT29487.1
CheW protein.
 
 0.948
SDT29465.1
MCP methyltransferase, CheR-type.
 
 0.933
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.