Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR83391.1 | SDS02742.1 | SAMN04490182_0092 | SAMN04490182_0562 | Phosphoserine phosphatase. | Cysteine synthase A. | 0.711 |
SDR83391.1 | SDS14601.1 | SAMN04490182_0092 | SAMN04490182_0842 | Phosphoserine phosphatase. | Chorismate mutase. | 0.657 |
SDR83391.1 | SDT35615.1 | SAMN04490182_0092 | SAMN04490182_4260 | Phosphoserine phosphatase. | L-threonine synthase. | 0.816 |
SDR83391.1 | SDT52324.1 | SAMN04490182_0092 | SAMN04490182_5168 | Phosphoserine phosphatase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.580 |
SDR83391.1 | aroA | SAMN04490182_0092 | SAMN04490182_0844 | Phosphoserine phosphatase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.670 |
SDR83391.1 | pdxB | SAMN04490182_0092 | SAMN04490182_0757 | Phosphoserine phosphatase. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.526 |
SDR83391.1 | serB | SAMN04490182_0092 | SAMN04490182_6038 | Phosphoserine phosphatase. | Phosphoserine phosphatase. | 0.801 |
SDR83391.1 | serC | SAMN04490182_0092 | SAMN04490182_0841 | Phosphoserine phosphatase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.963 |
SDS02742.1 | SDR83391.1 | SAMN04490182_0562 | SAMN04490182_0092 | Cysteine synthase A. | Phosphoserine phosphatase. | 0.711 |
SDS02742.1 | SDT35615.1 | SAMN04490182_0562 | SAMN04490182_4260 | Cysteine synthase A. | L-threonine synthase. | 0.405 |
SDS02742.1 | serB | SAMN04490182_0562 | SAMN04490182_6038 | Cysteine synthase A. | Phosphoserine phosphatase. | 0.664 |
SDS02742.1 | serC | SAMN04490182_0562 | SAMN04490182_0841 | Cysteine synthase A. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.948 |
SDS14601.1 | SDR83391.1 | SAMN04490182_0842 | SAMN04490182_0092 | Chorismate mutase. | Phosphoserine phosphatase. | 0.657 |
SDS14601.1 | SDT35615.1 | SAMN04490182_0842 | SAMN04490182_4260 | Chorismate mutase. | L-threonine synthase. | 0.600 |
SDS14601.1 | aroA | SAMN04490182_0842 | SAMN04490182_0844 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.999 |
SDS14601.1 | serC | SAMN04490182_0842 | SAMN04490182_0841 | Chorismate mutase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.982 |
SDT35615.1 | SDR83391.1 | SAMN04490182_4260 | SAMN04490182_0092 | L-threonine synthase. | Phosphoserine phosphatase. | 0.816 |
SDT35615.1 | SDS02742.1 | SAMN04490182_4260 | SAMN04490182_0562 | L-threonine synthase. | Cysteine synthase A. | 0.405 |
SDT35615.1 | SDS14601.1 | SAMN04490182_4260 | SAMN04490182_0842 | L-threonine synthase. | Chorismate mutase. | 0.600 |
SDT35615.1 | SDT52324.1 | SAMN04490182_4260 | SAMN04490182_5168 | L-threonine synthase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.618 |
page 1 of 4