STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS27400.1Glycosyltransferase involved in cell wall bisynthesis. (405 aa)    
Predicted Functional Partners:
SDS27480.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.968
SDS27536.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.965
SDS27587.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
  
 
 0.956
SDS27326.1
O-antigen ligase like membrane protein.
 
 
 0.954
SDS27367.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.941
SDS27630.1
Rhamnosyltransferase.
  
  
 0.935
SDS27668.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.933
SDS27226.1
Fucose 4-O-acetylase; Manually curated.
  
  
 0.884
SDS27280.1
Murein biosynthesis integral membrane protein MurJ.
     
 0.842
SDS27707.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.831
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
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