STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS31539.1Branched-chain alpha-keto acid dehydrogenase E1 component. (411 aa)    
Predicted Functional Partners:
lpdA-2
Dihydrolipoamide dehydrogenase.
 
 
 0.999
SDS31460.1
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
 
 0.999
SDS31503.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
 0.999
SDS45840.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.999
lpdA
Dihydrolipoamide dehydrogenase.
 
 
 0.991
SDR90543.1
Leucine dehydrogenase.
 
 
 0.981
SDS21885.1
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
 0.980
aceF
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.979
SDS31369.1
Branched chain amino acid aminotransferase apoenzyme.
  
 
 0.975
SDS45934.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.968
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.