Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR81660.1 | SDS42836.1 | SAMN04490182_0051 | SAMN04490182_1517 | Sulfite reductase (NADPH) flavoprotein alpha-component. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.787 |
SDR81660.1 | SDS82269.1 | SAMN04490182_0051 | SAMN04490182_2495 | Sulfite reductase (NADPH) flavoprotein alpha-component. | Oxidoreductase NAD-binding domain-containing protein. | 0.906 |
SDR81660.1 | mgtA | SAMN04490182_0051 | SAMN04490182_1302 | Sulfite reductase (NADPH) flavoprotein alpha-component. | Mg2+-importing ATPase. | 0.772 |
SDS05268.1 | SDS42836.1 | SAMN04490182_0624 | SAMN04490182_1517 | Subtilase-type serine protease. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.551 |
SDS05268.1 | mgtA | SAMN04490182_0624 | SAMN04490182_1302 | Subtilase-type serine protease. | Mg2+-importing ATPase. | 0.668 |
SDS42836.1 | SDR81660.1 | SAMN04490182_1517 | SAMN04490182_0051 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.787 |
SDS42836.1 | SDS05268.1 | SAMN04490182_1517 | SAMN04490182_0624 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Subtilase-type serine protease. | 0.551 |
SDS42836.1 | SDS82269.1 | SAMN04490182_1517 | SAMN04490182_2495 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Oxidoreductase NAD-binding domain-containing protein. | 0.811 |
SDS42836.1 | atpA | SAMN04490182_1517 | SAMN04490182_5471 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.710 |
SDS42836.1 | atpD | SAMN04490182_1517 | SAMN04490182_5469 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.614 |
SDS42836.1 | atpE | SAMN04490182_1517 | SAMN04490182_5474 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.680 |
SDS42836.1 | atpH | SAMN04490182_1517 | SAMN04490182_5472 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.748 |
SDS42836.1 | mgtA | SAMN04490182_1517 | SAMN04490182_1302 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Mg2+-importing ATPase. | 0.702 |
SDS53050.1 | mgtA | SAMN04490182_1753 | SAMN04490182_1302 | Putative Mg2+ transporter-C (MgtC) family protein. | Mg2+-importing ATPase. | 0.903 |
SDS82269.1 | SDR81660.1 | SAMN04490182_2495 | SAMN04490182_0051 | Oxidoreductase NAD-binding domain-containing protein. | Sulfite reductase (NADPH) flavoprotein alpha-component. | 0.906 |
SDS82269.1 | SDS42836.1 | SAMN04490182_2495 | SAMN04490182_1517 | Oxidoreductase NAD-binding domain-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.811 |
SDS82269.1 | atpA | SAMN04490182_2495 | SAMN04490182_5471 | Oxidoreductase NAD-binding domain-containing protein. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.435 |
SDS82269.1 | atpE | SAMN04490182_2495 | SAMN04490182_5474 | Oxidoreductase NAD-binding domain-containing protein. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.436 |
SDS82269.1 | mgtA | SAMN04490182_2495 | SAMN04490182_1302 | Oxidoreductase NAD-binding domain-containing protein. | Mg2+-importing ATPase. | 0.801 |
SDT40135.1 | mgtA | SAMN04490182_4469 | SAMN04490182_1302 | Hypothetical protein. | Mg2+-importing ATPase. | 0.673 |
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