Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDR84573.1 | SDS08438.1 | SAMN04490182_0121 | SAMN04490182_0698 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Multi-sensor hybrid histidine kinase. | 0.610 |
| SDR84573.1 | SDS38906.1 | SAMN04490182_0121 | SAMN04490182_1425 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains. | 0.891 |
| SDR84573.1 | SDS53399.1 | SAMN04490182_0121 | SAMN04490182_1759 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.640 |
| SDR84573.1 | SDS58045.1 | SAMN04490182_0121 | SAMN04490182_1871 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.814 |
| SDR84573.1 | SDS58501.1 | SAMN04490182_0121 | SAMN04490182_1881 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.610 |
| SDR84573.1 | SDS59498.1 | SAMN04490182_0121 | SAMN04490182_1905 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.786 |
| SDR84573.1 | SDS69606.1 | SAMN04490182_0121 | SAMN04490182_2156 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.813 |
| SDR84573.1 | SDS72055.1 | SAMN04490182_0121 | SAMN04490182_2217 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, cell cycle response regulator DivK. | 0.661 |
| SDR84573.1 | SDS95684.1 | SAMN04490182_0121 | SAMN04490182_2869 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.553 |
| SDR84573.1 | SDT22989.1 | SAMN04490182_0121 | SAMN04490182_3709 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Na+/proline symporter. | 0.821 |
| SDS08438.1 | SDR84573.1 | SAMN04490182_0698 | SAMN04490182_0121 | Multi-sensor hybrid histidine kinase. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.610 |
| SDS08438.1 | SDS38906.1 | SAMN04490182_0698 | SAMN04490182_1425 | Multi-sensor hybrid histidine kinase. | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains. | 0.757 |
| SDS08438.1 | SDS53399.1 | SAMN04490182_0698 | SAMN04490182_1759 | Multi-sensor hybrid histidine kinase. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.998 |
| SDS08438.1 | SDS58045.1 | SAMN04490182_0698 | SAMN04490182_1871 | Multi-sensor hybrid histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.999 |
| SDS08438.1 | SDS58501.1 | SAMN04490182_0698 | SAMN04490182_1881 | Multi-sensor hybrid histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
| SDS08438.1 | SDS59498.1 | SAMN04490182_0698 | SAMN04490182_1905 | Multi-sensor hybrid histidine kinase. | Signal transduction histidine kinase. | 0.999 |
| SDS08438.1 | SDS69606.1 | SAMN04490182_0698 | SAMN04490182_2156 | Multi-sensor hybrid histidine kinase. | Signal transduction histidine kinase. | 0.999 |
| SDS08438.1 | SDS72055.1 | SAMN04490182_0698 | SAMN04490182_2217 | Multi-sensor hybrid histidine kinase. | Two-component system, cell cycle response regulator DivK. | 0.999 |
| SDS08438.1 | SDS95684.1 | SAMN04490182_0698 | SAMN04490182_2869 | Multi-sensor hybrid histidine kinase. | Two-component system, NarL family, sensor histidine kinase BarA. | 0.999 |
| SDS08438.1 | SDT22989.1 | SAMN04490182_0698 | SAMN04490182_3709 | Multi-sensor hybrid histidine kinase. | Na+/proline symporter. | 0.999 |
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