STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS65418.1Phage regulatory protein CII (CP76). (140 aa)    
Predicted Functional Partners:
SDS65526.1
Hypothetical protein.
       0.634
SDS65571.1
Hypothetical protein.
       0.607
SDS65469.1
Hypothetical protein.
       0.604
SDS65393.1
DNA-binding transcriptional regulator Cro.
       0.591
SDS65697.1
Bacteriophage Lambda NinG protein.
       0.583
SDS65736.1
Hypothetical protein.
       0.580
SDS65606.1
Hypothetical protein.
       0.572
SDS65654.1
Hypothetical protein.
       0.572
SDS65353.1
SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase).
       0.405
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.