Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS28233.1 | SDS42836.1 | SAMN04490182_1175 | SAMN04490182_1517 | 3-oxoacyl-[acyl-carrier protein] reductase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.988 |
SDS28233.1 | SDS74996.1 | SAMN04490182_1175 | SAMN04490182_2294 | 3-oxoacyl-[acyl-carrier protein] reductase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.813 |
SDS28233.1 | SDT58910.1 | SAMN04490182_1175 | SAMN04490182_5619 | 3-oxoacyl-[acyl-carrier protein] reductase. | Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein. | 0.812 |
SDS28233.1 | SDT62996.1 | SAMN04490182_1175 | SAMN04490182_5934 | 3-oxoacyl-[acyl-carrier protein] reductase. | Glutamate synthase (NADPH) large subunit. | 0.726 |
SDS42836.1 | SDS28233.1 | SAMN04490182_1517 | SAMN04490182_1175 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.988 |
SDS42836.1 | SDS74913.1 | SAMN04490182_1517 | SAMN04490182_2292 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Catechol 2,3-dioxygenase. | 0.497 |
SDS42836.1 | SDS74996.1 | SAMN04490182_1517 | SAMN04490182_2294 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.972 |
SDS42836.1 | SDS75075.1 | SAMN04490182_1517 | SAMN04490182_2296 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Acetolactate synthase-1/2/3 large subunit. | 0.681 |
SDS42836.1 | SDS77104.1 | SAMN04490182_1517 | SAMN04490182_2347 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.988 |
SDS42836.1 | SDT02348.1 | SAMN04490182_1517 | SAMN04490182_3058 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.988 |
SDS42836.1 | SDT58910.1 | SAMN04490182_1517 | SAMN04490182_5619 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein. | 0.999 |
SDS42836.1 | SDT62996.1 | SAMN04490182_1517 | SAMN04490182_5934 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Glutamate synthase (NADPH) large subunit. | 0.990 |
SDS74878.1 | SDS74913.1 | SAMN04490182_2291 | SAMN04490182_2292 | Amino acid synthesis. | Catechol 2,3-dioxygenase. | 0.859 |
SDS74878.1 | SDS74960.1 | SAMN04490182_2291 | SAMN04490182_2293 | Amino acid synthesis. | Sortilin, neurotensin receptor 3. | 0.829 |
SDS74878.1 | SDS74996.1 | SAMN04490182_2291 | SAMN04490182_2294 | Amino acid synthesis. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.777 |
SDS74878.1 | SDS75075.1 | SAMN04490182_2291 | SAMN04490182_2296 | Amino acid synthesis. | Acetolactate synthase-1/2/3 large subunit. | 0.761 |
SDS74913.1 | SDS42836.1 | SAMN04490182_2292 | SAMN04490182_1517 | Catechol 2,3-dioxygenase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.497 |
SDS74913.1 | SDS74878.1 | SAMN04490182_2292 | SAMN04490182_2291 | Catechol 2,3-dioxygenase. | Amino acid synthesis. | 0.859 |
SDS74913.1 | SDS74960.1 | SAMN04490182_2292 | SAMN04490182_2293 | Catechol 2,3-dioxygenase. | Sortilin, neurotensin receptor 3. | 0.950 |
SDS74913.1 | SDS74996.1 | SAMN04490182_2292 | SAMN04490182_2294 | Catechol 2,3-dioxygenase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.876 |
page 1 of 4