STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS79731.1N-methylhydantoinase B. (551 aa)    
Predicted Functional Partners:
SDS79688.1
N-methylhydantoinase A.
 0.999
putA
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.898
SDS79791.1
Asp/Glu/hydantoin racemase.
 
     0.653
SDS79761.1
Hypothetical protein.
       0.643
ggt-2
Gamma-glutamyltranspeptidase / glutathione hydrolase.
 
  
  0.573
ggt
Gamma-glutamyltranspeptidase / glutathione hydrolase.
 
  
  0.571
SDS79831.1
MFS transporter, putative metabolite:H+ symporter.
 
     0.551
SDS10526.1
Sensor histidine kinase inhibitor, KipI family.
    
 0.546
SDT30990.1
Allophanate hydrolase subunit 1.
    
 0.546
SDS10562.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
    
  0.539
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
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