STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS82196.1Nitrite reductase (NADH) small subunit. (120 aa)    
Predicted Functional Partners:
SDS82235.1
Nitrite reductase (NADH) large subunit.
 0.999
SDT55241.1
Rubredoxin.
  
 0.956
SDT55227.1
rubredoxin-NAD+ reductase; Belongs to the FAD-dependent oxidoreductase family.
 
 0.948
SDS82269.1
Oxidoreductase NAD-binding domain-containing protein.
 
 
 0.943
SDS89471.1
Respiratory nitrate reductase beta subunit.
  
 
 0.925
SDS39417.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
 0.912
SDS89505.1
Nitrate reductase alpha subunit.
  
 
 0.906
SDR80595.1
Uncharacterized protein.
   
  0.905
SDS89407.1
Nitrate reductase gamma subunit.
  
 
 0.892
SDT49651.1
2,4-dienoyl-CoA reductase.
  
 0.878
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
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