Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS42836.1 | SDS72469.1 | SAMN04490182_1517 | SAMN04490182_2227 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.484 |
SDS42836.1 | SDS98015.1 | SAMN04490182_1517 | SAMN04490182_2935 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | DNA-binding transcriptional regulator, AcrR family. | 0.469 |
SDS42836.1 | SDS98050.1 | SAMN04490182_1517 | SAMN04490182_2936 | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | Putative ABC transport system ATP-binding protein. | 0.583 |
SDS72469.1 | SDS42836.1 | SAMN04490182_2227 | SAMN04490182_1517 | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.484 |
SDS72469.1 | SDS98015.1 | SAMN04490182_2227 | SAMN04490182_2935 | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | DNA-binding transcriptional regulator, AcrR family. | 0.455 |
SDS98015.1 | SDS42836.1 | SAMN04490182_2935 | SAMN04490182_1517 | DNA-binding transcriptional regulator, AcrR family. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.469 |
SDS98015.1 | SDS72469.1 | SAMN04490182_2935 | SAMN04490182_2227 | DNA-binding transcriptional regulator, AcrR family. | VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.455 |
SDS98015.1 | SDS98050.1 | SAMN04490182_2935 | SAMN04490182_2936 | DNA-binding transcriptional regulator, AcrR family. | Putative ABC transport system ATP-binding protein. | 0.417 |
SDS98050.1 | SDS42836.1 | SAMN04490182_2936 | SAMN04490182_1517 | Putative ABC transport system ATP-binding protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.583 |
SDS98050.1 | SDS98015.1 | SAMN04490182_2936 | SAMN04490182_2935 | Putative ABC transport system ATP-binding protein. | DNA-binding transcriptional regulator, AcrR family. | 0.417 |