STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT16638.1FIST C domain-containing protein. (673 aa)    
Predicted Functional Partners:
SDS58045.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.998
SDR97712.1
Two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE.
 
 0.987
SDS59498.1
Signal transduction histidine kinase.
 
 0.983
SDS69606.1
Signal transduction histidine kinase.
  
 0.981
SDT50942.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
 0.974
SDR87762.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.971
SDT29487.1
CheW protein.
 
 0.966
SDS72055.1
Two-component system, cell cycle response regulator DivK.
  
 0.931
SDS57297.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.929
SDS33787.1
Two-component system, NarL family, sensor histidine kinase EvgS.
 
 0.922
Your Current Organism:
Pseudomonas cedrina
NCBI taxonomy Id: 651740
Other names: CFML 96-198, CIP 105541, DSM 17516, P. cedrina, Pseudomonas cedrella, Pseudomonas cedrina corrig. Dabboussi et al. 2002 emend. Behrendt et al. 2009, Pseudomonas sp. H-R, Pseudomonas sp. HG-K2, Pseudomonas sp. LB-C, Pseudomonas sp. LB-Z10, Pseudomonas sp. LB-Z3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.