Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR88652.1 | SDR88752.1 | SAMN04490182_0222 | SAMN04490182_0224 | poly(beta-D-mannuronate) C5 epimerase. | Alginate biosynthesis protein AlgK. | 0.992 |
SDR88652.1 | SDR88859.1 | SAMN04490182_0222 | SAMN04490182_0226 | poly(beta-D-mannuronate) C5 epimerase. | Glycosyltransferase Alg8. | 0.999 |
SDR88652.1 | SDR91759.1 | SAMN04490182_0222 | SAMN04490182_0298 | poly(beta-D-mannuronate) C5 epimerase. | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | 0.435 |
SDR88652.1 | SDT29677.1 | SAMN04490182_0222 | SAMN04490182_3987 | poly(beta-D-mannuronate) C5 epimerase. | Arc-like DNA binding domain-containing protein. | 0.774 |
SDR88652.1 | SDT34996.1 | SAMN04490182_0222 | SAMN04490182_4228 | poly(beta-D-mannuronate) C5 epimerase. | Hypothetical protein. | 0.658 |
SDR88652.1 | SDT35020.1 | SAMN04490182_0222 | SAMN04490182_4229 | poly(beta-D-mannuronate) C5 epimerase. | Hypothetical protein. | 0.471 |
SDR88752.1 | SDR88652.1 | SAMN04490182_0224 | SAMN04490182_0222 | Alginate biosynthesis protein AlgK. | poly(beta-D-mannuronate) C5 epimerase. | 0.992 |
SDR88752.1 | SDR88859.1 | SAMN04490182_0224 | SAMN04490182_0226 | Alginate biosynthesis protein AlgK. | Glycosyltransferase Alg8. | 0.986 |
SDR88752.1 | SDT29677.1 | SAMN04490182_0224 | SAMN04490182_3987 | Alginate biosynthesis protein AlgK. | Arc-like DNA binding domain-containing protein. | 0.774 |
SDR88752.1 | SDT34996.1 | SAMN04490182_0224 | SAMN04490182_4228 | Alginate biosynthesis protein AlgK. | Hypothetical protein. | 0.682 |
SDR88752.1 | SDT35020.1 | SAMN04490182_0224 | SAMN04490182_4229 | Alginate biosynthesis protein AlgK. | Hypothetical protein. | 0.468 |
SDR88859.1 | SDR88652.1 | SAMN04490182_0226 | SAMN04490182_0222 | Glycosyltransferase Alg8. | poly(beta-D-mannuronate) C5 epimerase. | 0.999 |
SDR88859.1 | SDR88752.1 | SAMN04490182_0226 | SAMN04490182_0224 | Glycosyltransferase Alg8. | Alginate biosynthesis protein AlgK. | 0.986 |
SDR88859.1 | SDT29677.1 | SAMN04490182_0226 | SAMN04490182_3987 | Glycosyltransferase Alg8. | Arc-like DNA binding domain-containing protein. | 0.754 |
SDR88859.1 | SDT34996.1 | SAMN04490182_0226 | SAMN04490182_4228 | Glycosyltransferase Alg8. | Hypothetical protein. | 0.644 |
SDR88859.1 | SDT35020.1 | SAMN04490182_0226 | SAMN04490182_4229 | Glycosyltransferase Alg8. | Hypothetical protein. | 0.557 |
SDR91759.1 | SDR88652.1 | SAMN04490182_0298 | SAMN04490182_0222 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | poly(beta-D-mannuronate) C5 epimerase. | 0.435 |
SDR91759.1 | SDT32309.1 | SAMN04490182_0298 | SAMN04490182_4108 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | Putative iron-regulated protein. | 0.569 |
SDR91759.1 | SDT34970.1 | SAMN04490182_0298 | SAMN04490182_4227 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | CxxC motif-containing protein, DUF1111 family. | 0.430 |
SDR91759.1 | SDT34996.1 | SAMN04490182_0298 | SAMN04490182_4228 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | Hypothetical protein. | 0.700 |
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