Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS51496.1 | SDT37782.1 | SAMN04490182_1715 | SAMN04490182_4359 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.450 |
SDS81632.1 | SDT37782.1 | SAMN04490182_2474 | SAMN04490182_4359 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.778 |
SDT37782.1 | SDS51496.1 | SAMN04490182_4359 | SAMN04490182_1715 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.450 |
SDT37782.1 | SDS81632.1 | SAMN04490182_4359 | SAMN04490182_2474 | Threonine/homoserine/homoserine lactone efflux protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.778 |
SDT37782.1 | SDT37805.1 | SAMN04490182_4359 | SAMN04490182_4360 | Threonine/homoserine/homoserine lactone efflux protein. | PH domain-containing protein. | 0.520 |
SDT37782.1 | carA | SAMN04490182_4359 | SAMN04490182_4516 | Threonine/homoserine/homoserine lactone efflux protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.443 |
SDT37782.1 | carB | SAMN04490182_4359 | SAMN04490182_4515 | Threonine/homoserine/homoserine lactone efflux protein. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.401 |
SDT37805.1 | SDT37782.1 | SAMN04490182_4360 | SAMN04490182_4359 | PH domain-containing protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.520 |
carA | SDT37782.1 | SAMN04490182_4516 | SAMN04490182_4359 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.443 |
carA | carB | SAMN04490182_4516 | SAMN04490182_4515 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
carB | SDT37782.1 | SAMN04490182_4515 | SAMN04490182_4359 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.401 |
carB | carA | SAMN04490182_4515 | SAMN04490182_4516 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.999 |