Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS88892.1 | SDS99484.1 | SAMN04490182_2673 | SAMN04490182_2976 | Hypothetical protein. | Exodeoxyribonuclease III. | 0.918 |
SDS88892.1 | SDT54559.1 | SAMN04490182_2673 | SAMN04490182_5324 | Hypothetical protein. | Exodeoxyribonuclease-3. | 0.918 |
SDS88892.1 | SDT61785.1 | SAMN04490182_2673 | SAMN04490182_5821 | Hypothetical protein. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.642 |
SDS99484.1 | SDS88892.1 | SAMN04490182_2976 | SAMN04490182_2673 | Exodeoxyribonuclease III. | Hypothetical protein. | 0.918 |
SDS99484.1 | SDT47715.1 | SAMN04490182_2976 | SAMN04490182_4858 | Exodeoxyribonuclease III. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.882 |
SDS99484.1 | SDT54559.1 | SAMN04490182_2976 | SAMN04490182_5324 | Exodeoxyribonuclease III. | Exodeoxyribonuclease-3. | 0.955 |
SDS99484.1 | SDT57104.1 | SAMN04490182_2976 | SAMN04490182_5489 | Exodeoxyribonuclease III. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.951 |
SDS99484.1 | SDT61785.1 | SAMN04490182_2976 | SAMN04490182_5821 | Exodeoxyribonuclease III. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.935 |
SDS99484.1 | nth | SAMN04490182_2976 | SAMN04490182_0387 | Exodeoxyribonuclease III. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.942 |
SDT33945.1 | SDT47715.1 | SAMN04490182_4182 | SAMN04490182_4858 | 8-oxo-dGTP diphosphatase. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.579 |
SDT33945.1 | SDT61785.1 | SAMN04490182_4182 | SAMN04490182_5821 | 8-oxo-dGTP diphosphatase. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.604 |
SDT33945.1 | SDT61799.1 | SAMN04490182_4182 | SAMN04490182_5822 | 8-oxo-dGTP diphosphatase. | AsmA protein. | 0.480 |
SDT47715.1 | SDS99484.1 | SAMN04490182_4858 | SAMN04490182_2976 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | Exodeoxyribonuclease III. | 0.882 |
SDT47715.1 | SDT33945.1 | SAMN04490182_4858 | SAMN04490182_4182 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 8-oxo-dGTP diphosphatase. | 0.579 |
SDT47715.1 | SDT54559.1 | SAMN04490182_4858 | SAMN04490182_5324 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | Exodeoxyribonuclease-3. | 0.882 |
SDT47715.1 | SDT61785.1 | SAMN04490182_4858 | SAMN04490182_5821 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.638 |
SDT54559.1 | SDS88892.1 | SAMN04490182_5324 | SAMN04490182_2673 | Exodeoxyribonuclease-3. | Hypothetical protein. | 0.918 |
SDT54559.1 | SDS99484.1 | SAMN04490182_5324 | SAMN04490182_2976 | Exodeoxyribonuclease-3. | Exodeoxyribonuclease III. | 0.955 |
SDT54559.1 | SDT47715.1 | SAMN04490182_5324 | SAMN04490182_4858 | Exodeoxyribonuclease-3. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.882 |
SDT54559.1 | SDT57104.1 | SAMN04490182_5324 | SAMN04490182_5489 | Exodeoxyribonuclease-3. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.951 |
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