STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40429.1Peptidoglycan hydrolase. (133 aa)    
Predicted Functional Partners:
flgH2
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.968
flgG
Lateral flagellar basal-body rod protein LfgG; Belongs to the flagella basal body rod proteins family.
  
 
 0.967
flgI1
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.963
flgB
Lateral flagellar basal body protein, LfgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.954
flgK
Flagellar basal body rod protein subunit C.
  
  
 0.952
flgF
Lateral flagellar basal-body rod protein LfgF; Belongs to the flagella basal body rod proteins family.
 
  
 0.939
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.932
ALP40828.1
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.929
ALP39622.1
Flagellar protein FliO.
 
  
 0.924
flgE
Flagellar hook protein FlgE.
  
  
 0.921
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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