STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40668.1PTS ascorbate transporter subunit IIB. (95 aa)    
Predicted Functional Partners:
cmtB
PTS system mannitol-specific transporter subunit IIA.
 
 
 0.996
ALP43751.1
PTS beta-glucoside transporter subunit IIBC.
 
 
 0.996
ptsH
PTS sugar transporter.
    
  0.906
ALP42168.1
Transcription antiterminator BglG.
 
  
 0.788
ALP42034.1
PTS fructose transporter subunit IIA.
 
  
 0.748
manP
PTS fructose transporter subunit IIC.
 
  
 0.675
treB
PTS system trehalose(maltose)-specific transporter subunits IIBC.
  
   
 0.517
WL1483_92
Hypothetical protein.
 
  
 0.466
ALP41952.1
LacI family transcriptional regulator.
       0.453
fruA
PTS system, fructose-specific, IIBC component.
  
  
 0.428
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.