Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALP40448.1 | ALP40527.1 | WL1483_4503 | WL1483_1108 | Homogentisate 1, 2-dioxygenase. | Fumarylacetoacetate hydrolase family protein. | 0.987 |
| ALP40448.1 | ltaA | WL1483_4503 | WL1483_125 | Homogentisate 1, 2-dioxygenase. | L-allo-threonine aldolase. | 0.491 |
| ALP40448.1 | maiA | WL1483_4503 | WL1483_2230 | Homogentisate 1, 2-dioxygenase. | Maleylacetoacetate isomerase. | 0.961 |
| ALP40448.1 | vllY | WL1483_4503 | WL1483_447 | Homogentisate 1, 2-dioxygenase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.999 |
| ALP40527.1 | ALP40448.1 | WL1483_1108 | WL1483_4503 | Fumarylacetoacetate hydrolase family protein. | Homogentisate 1, 2-dioxygenase. | 0.987 |
| ALP40527.1 | ltaA | WL1483_1108 | WL1483_125 | Fumarylacetoacetate hydrolase family protein. | L-allo-threonine aldolase. | 0.439 |
| ALP40527.1 | maiA | WL1483_1108 | WL1483_2230 | Fumarylacetoacetate hydrolase family protein. | Maleylacetoacetate isomerase. | 0.944 |
| ALP40527.1 | vllY | WL1483_1108 | WL1483_447 | Fumarylacetoacetate hydrolase family protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.976 |
| ALP43225.1 | gcvP | WL1483_4938 | WL1483_1243 | Short-chain alcohol dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.533 |
| ALP43225.1 | kbl | WL1483_4938 | WL1483_4223 | Short-chain alcohol dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.901 |
| ALP43225.1 | ltaA | WL1483_4938 | WL1483_125 | Short-chain alcohol dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | L-allo-threonine aldolase. | 0.909 |
| gcvP | ALP43225.1 | WL1483_1243 | WL1483_4938 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Short-chain alcohol dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.533 |
| gcvP | gltB | WL1483_1243 | WL1483_2763 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase subunit alpha. | 0.920 |
| gcvP | glyA | WL1483_1243 | WL1483_809 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.995 |
| gcvP | kbl | WL1483_1243 | WL1483_4223 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.941 |
| gcvP | ltaA | WL1483_1243 | WL1483_125 | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | L-allo-threonine aldolase. | 0.947 |
| gltB | gcvP | WL1483_2763 | WL1483_1243 | Glutamate synthase subunit alpha. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.920 |
| gltB | ltaA | WL1483_2763 | WL1483_125 | Glutamate synthase subunit alpha. | L-allo-threonine aldolase. | 0.469 |
| glyA | gcvP | WL1483_809 | WL1483_1243 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.995 |
| glyA | kbl | WL1483_809 | WL1483_4223 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.935 |
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