STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrfDProtein NrfD. (319 aa)    
Predicted Functional Partners:
nrfB
Formate-dependent nitrite reductase, penta-heme cytochrome c.
 
  
 0.982
nrfA
Cytochrome c nitrite reductase subunit c552; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
 
  
 0.968
nrfC
Formate-dependent nitrite reductase, 4Fe4S subunit.
 
  
 0.942
nrfG
Formate-dependent nitrite reductase complex nrfG subunit; Possible subunit of a heme lyase.
 
    0.822
nrfE
Cytochrome c-type biogenesis protein CcmF.
 
  
 0.771
napG
MauM/NapG ferredoxin-type protein.
 
  
 0.744
napA
Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
  
 0.696
ALP43150.1
Hypothetical protein.
  
     0.687
napH
Quinol dehydrogenase.
  
  
 0.678
hybA
Hydrogenase 2 protein HybA.
 
  
 0.673
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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