Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALP42897.1 | rnfH | WL1483_3478 | WL1483_1310 | Hypothetical protein. | Protein YfjF; Belongs to the UPF0125 (RnfH) family. | 0.919 |
| ALP42897.1 | smpB | WL1483_3478 | WL1483_3603 | Hypothetical protein. | Single-stranded DNA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome t [...] | 0.586 |
| ALP42925.1 | rnfH | WL1483_3506 | WL1483_1310 | Integral membrane protein. | Protein YfjF; Belongs to the UPF0125 (RnfH) family. | 0.604 |
| rnfA | rnfB | WL1483_572 | WL1483_367 | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.996 |
| rnfA | rnfD | WL1483_572 | WL1483_1854 | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.995 |
| rnfA | rnfE | WL1483_572 | WL1483_5018 | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | NADH: ubiquinone oxidoreductase, Na(+)-translocating subunit D; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.989 |
| rnfA | rnfG | WL1483_572 | WL1483_4918 | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | RnfABCDGE type electron transport complex subunit G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.992 |
| rnfA | rnfH | WL1483_572 | WL1483_1310 | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Protein YfjF; Belongs to the UPF0125 (RnfH) family. | 0.582 |
| rnfA | rsxC | WL1483_572 | WL1483_1215 | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.994 |
| rnfB | rnfA | WL1483_367 | WL1483_572 | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.996 |
| rnfB | rnfD | WL1483_367 | WL1483_1854 | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.992 |
| rnfB | rnfE | WL1483_367 | WL1483_5018 | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | NADH: ubiquinone oxidoreductase, Na(+)-translocating subunit D; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.992 |
| rnfB | rnfG | WL1483_367 | WL1483_4918 | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | RnfABCDGE type electron transport complex subunit G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.994 |
| rnfB | rnfH | WL1483_367 | WL1483_1310 | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Protein YfjF; Belongs to the UPF0125 (RnfH) family. | 0.828 |
| rnfB | rsxC | WL1483_367 | WL1483_1215 | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.997 |
| rnfD | rnfA | WL1483_1854 | WL1483_572 | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.995 |
| rnfD | rnfB | WL1483_1854 | WL1483_367 | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Putative NADH: ubiquinone oxidoreductase subunit RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.992 |
| rnfD | rnfE | WL1483_1854 | WL1483_5018 | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | NADH: ubiquinone oxidoreductase, Na(+)-translocating subunit D; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.998 |
| rnfD | rnfG | WL1483_1854 | WL1483_4918 | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | RnfABCDGE type electron transport complex subunit G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.998 |
| rnfD | rnfH | WL1483_1854 | WL1483_1310 | Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | Protein YfjF; Belongs to the UPF0125 (RnfH) family. | 0.698 |
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