STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40834.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
ALP41815.1
Hypothetical protein.
       0.773
ALP43373.1
Hypothetical protein.
       0.752
ALP43600.1
Hypothetical protein.
  
     0.668
ALP42298.1
Zn-ribbon-containing protein.
       0.667
ALP40044.1
Hypothetical protein.
  
     0.635
ALP42489.1
Na(+)-translocating NADH-quinone reductase subunit E.
  
     0.606
truC
tRNA pseudouridine synthase C.
       0.570
ALP43743.1
Hypothetical protein.
       0.570
ALP42015.1
Hypothetical protein.
  
     0.567
ALP42217.1
Hypothetical protein.
  
     0.544
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.