Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALP39567.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
ALP41312.1
Putative multidrug resistance protein.
     0.994
ALP40422.1
Hypothetical protein.
 
 
 0.975
ALP40885.1
Multidrug resistance protein.
 
    
0.929
ALP41383.1
HlyD family secretion protein.
 
 
 0.904
ALP40567.1
RND efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.876
ALP43157.1
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.848
acrE
Acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.796
ALP40906.1
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.731
ALP42736.1
Response regulator receiver.
 
     0.696
macA
Macrolide-specific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.670
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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