STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40955.1HD domain-containing protein. (504 aa)    
Predicted Functional Partners:
ALP43038.1
Hypothetical protein.
 
 0.913
ALP42115.1
Hypothetical protein.
 
 0.862
ALP40183.1
Sensor histidine kinase.
 
 
 0.812
ALP39573.1
Diguanylate cyclase.
  
 0.799
ALP40288.1
Sensory box/GGDEF domain/eal domain-containing protein.
 
 0.783
ALP41064.1
Sensory box protein.
 
 0.778
ALP40397.1
Hypothetical protein.
 
 0.751
ALP40990.1
Sensor histidine kinase.
 
 0.733
ALP42102.1
Hypothetical protein.
 
 0.720
ALP42953.1
Hypothetical protein.
  
    0.701
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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