Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALP39573.1Diguanylate cyclase. (371 aa)    
Predicted Functional Partners:
arcB
Aerobic respiration control sensor protein ArcB.
 
 
 0.968
barA
Hybrid sensory histidine kinase BarA.
 
 
 0.948
ALP42102.1
Hypothetical protein.
 
 0.946
ALP41039.1
Tmao reductase sytem sensor tors.
 
 
 0.934
ALP42115.1
Hypothetical protein.
 
 
 0.926
rpfG
Chemotaxis protein CheY.
  
 0.896
ALP40745.1
Metal-dependent phosphohydrolase with HD domain.
   
 0.865
ALP39595.1
Hypothetical protein.
   
 0.848
ALP40288.1
Sensory box/GGDEF domain/eal domain-containing protein.
 
 
0.848
ALP42534.1
Chemotaxis protein CheY.
 
 0.834
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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