STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP40965.1Gfo/Idh/MocA family oxidoreductase. (318 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.781
lysS
lysyl-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.751
rfbB
dTDP-glucose 4, 6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.725
ALP41553.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.702
arnB
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase.
  
  
 0.702
ybjT
Nucleoside-diphosphate-sugar epimerase.
   
 
 0.640
pseB
Lipopolysaccharide O-Ag biosynthesis protein FlmA.
     
 0.609
ALP40718.1
Nucleotidyl transferase family protein.
  
  
 0.598
pseF
NeuA protein.
  
  
 0.588
ALP41488.1
Long-chain-fatty-acid--luciferin-component ligase, Acyl-protein synthase.
     
 0.586
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.