STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capDProtein WbgZ. (637 aa)    
Predicted Functional Partners:
ALP41553.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.878
arnB
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase.
 
  
 0.878
galE-2
UDP-glucose 4-epimerase.
 
  
 0.782
ALP43267.1
Sugar ABC transporter substrate-binding protein.
  
  
 0.754
ALP42407.1
Glycosyltransferase WbpL.
 
   
 0.752
ALP39837.1
Hypothetical protein.
  
  
 0.679
flgG
Lateral flagellar basal-body rod protein LfgG; Belongs to the flagella basal body rod proteins family.
  
  
 0.659
ALP42654.1
Flagellar basal body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.653
ALP40945.1
Oligosaccharide translocase.
  
  
 0.620
ALP39846.1
Polymerase.
  
  
 0.620
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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