STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoCTwo-component system lateral flagellar response regulator. (458 aa)    
Predicted Functional Partners:
ALP41848.1
Two component system flagellar sensor histidine kinase FlrB.
 0.942
atoC-2
Fis family transcriptional regulator.
  
  
 
0.909
fliG-2
Flagellar motor switch protein G.
  
  
 0.881
ALP43476.1
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.857
fliE-2
Lateral flagellar hook basal body protein, LfiE.
  
  
 0.854
ALP41321.1
Hypothetical protein.
  
  
 0.852
ALP43680.1
Lateral flagellar assembly protein FliH.
  
    0.849
fliI-2
Lateral flagellar FliI-like assembly ATPase.
  
    0.840
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.792
ALP42491.1
Lateral flagellar protein, LfiJ.
       0.767
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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