STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhBNAD-glutamate dehydrogenase. (1612 aa)    
Predicted Functional Partners:
putA
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.942
gltB
Glutamate synthase subunit alpha.
     
 0.940
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
  
 
  0.923
alaA
Aminotransferase AlaT.
  
  
 0.914
nirB
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
  0.909
glnA
Glutamine synthetase, type I.
     
 0.909
nasB
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
  0.909
ALP43594.1
Hypothetical protein; Belongs to the glutamine synthetase family.
     
 0.909
ALP40318.1
Glutamine synthetase.
     
 0.909
gltD
Glutamate synthase subunit beta.
     
 0.908
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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