Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yccASecY stabilizing membrane protein; Belongs to the BI1 family. (218 aa)    
Predicted Functional Partners:
htpX
Heat shock protein HtpX; Belongs to the peptidase M48B family.
  
  
 0.743
tusE
Dissimilatory sulfite reductase, gamma subunit; Part of a sulfur-relay system.
     
 0.583
hflK
hflK protein; HflC and HflK could encode or regulate a protease.
  
   
 0.581
ALP43765.1
Hypothetical protein.
       0.504
ALP40187.1
Hypothetical protein.
     
 0.504
ALP42513.1
Import inner membrane translocase subunit Tim44.
   
  
 0.486
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
  
 0.474
ALP42532.1
Hypothetical protein.
  
    0.427
msrB
methionine-R-sulfoxide reductase.
  
   0.425
msrB-2
Peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
  
   0.425
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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