STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP41261.1TetR family transcriptional regulator. (228 aa)    
Predicted Functional Partners:
ALP41949.1
Hypothetical protein.
 
 
   0.923
ALP40583.1
Patatin.
 
     0.904
ALP39961.1
Phosphohistidine phosphatase.
 
     0.859
acr1
Short-chain dehydrogenase.
 
     0.669
ALP39835.1
Lipase.
  
     0.491
ALP39529.1
Hypothetical protein.
  
     0.462
lipA
Lipase.
  
     0.455
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.448
ALP42564.1
Acyltransferase.
  
   
 0.439
ALP39986.1
Poly (3-hydroxybutyrate) depolymerase.
  
     0.433
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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