Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALP39617.1Proline sensor PrlS. (1153 aa)    
Predicted Functional Partners:
ALP42115.1
Hypothetical protein.
  
 
 0.965
arcB
Aerobic respiration control sensor protein ArcB.
  
 
 0.965
ALP42447.1
Chemotaxis protein CheY.
  
 
 0.939
putA
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.919
barA
Hybrid sensory histidine kinase BarA.
  
 
 0.916
ALP41039.1
Tmao reductase sytem sensor tors.
  
 
 0.907
ALP42102.1
Hypothetical protein.
  
 
 0.907
ALP43038.1
Hypothetical protein.
  
 
 0.870
agmR
Two component system response regulator, LuxR family protein.
 
 
 0.861
ALP40183.1
Sensor histidine kinase.
  
 
 0.833
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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