STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP39624.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
ALP40752.1
Hypothetical protein.
       0.697
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.658
ALP39966.1
ABC transporter substrate-binding protein.
   
   0.633
nifJ
Ferredoxin oxidoreductase.
  
   0.601
ALP41969.1
Hypothetical protein.
   
   0.523
mccA
methylcrotonoyl-CoA carboxylase.
   
   0.514
ALP42662.1
enoyl-CoA hydratase/isomerase family protein.
       0.484
ALP43029.1
MerR family transcriptional regulator.
       0.484
hmgCL
hydroxymethylglutaryl-CoA lyase.
       0.484
ALP40595.1
3-methylcrotonyl CoA carboxylase, beta subunit.
       0.475
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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