STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP41535.1Alpha-galactosidase. (548 aa)    
Predicted Functional Partners:
lacZ
beta-D-galactosidase.
 
 
 0.950
malZ
Maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.935
galM
Galactose mutarotase; Converts alpha-aldose to the beta-anomer.
 
 
  0.925
ALP41703.1
Peptidoglycan hydrolase FlgJ.
      
 0.665
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.640
ALP43358.1
Putative beta-amylase precursor.
 
   
 0.637
ALP42968.1
LrgA family protein.
 
     0.604
malF
Maltose transporter membrane protein.
 
    0.600
ALP40716.1
Hypothetical protein.
  
     0.589
ALP43253.1
Glycosidase.
 
  
 0.581
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.