Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALP41711.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
ALP43682.1
Hypothetical protein.
  
     0.764
ALP43234.1
dsDNA-mimic protein.
  
     0.754
ALP43057.1
Hypothetical protein; Belongs to the UPF0253 family.
  
     0.750
ALP43425.1
Hypothetical protein.
  
     0.732
mukF
Condesin subunit F; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.
  
     0.727
mukE
Condesin subunit E.
  
     0.726
ALP42333.1
Hypothetical protein.
  
     0.718
mukB
Cell division protein MukB.
  
     0.701
ALP39758.1
dsDNA-mimic protein; Belongs to the UPF0263 family.
  
     0.686
ycdZ
Chloride channel protein EriC.
  
     0.682
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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