Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALP39651.1Histidine kinase. (679 aa)    
Predicted Functional Partners:
pilR
Fis family transcriptional regulator.
 
 
 0.917
ALP40082.1
Tungsten ABC transporter substrate-binding protein.
 
     0.777
WL1483_54
ABC transporter permease.
 
     0.748
ALP43323.1
Hypothetical protein.
 
     0.732
ALP40101.1
DNA-binding protein.
  
     0.709
ALP43250.1
ABC transporter ATP-binding protein.
 
     0.701
ALP41911.1
Ferredoxin.
 
     0.685
ALP43604.1
TorD family cytoplasmic chaperone.
 
     0.656
fdhD-2
Formate dehydrogenase; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
     0.654
ALP40893.1
Formate dehydrogenase, gamma subunit.
 
     0.651
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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