STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP39651.1Histidine kinase. (679 aa)    
Predicted Functional Partners:
pilR
Fis family transcriptional regulator.
 
 
 0.918
ALP40082.1
Tungsten ABC transporter substrate-binding protein.
 
     0.774
WL1483_54
ABC transporter permease.
 
     0.751
ALP43323.1
Hypothetical protein.
 
     0.732
arcB
Aerobic respiration control sensor protein ArcB.
 
0.732
ALP40101.1
DNA-binding protein.
  
     0.709
ALP43250.1
ABC transporter ATP-binding protein.
 
     0.704
ALP41911.1
Ferredoxin.
 
     0.685
barA
Hybrid sensory histidine kinase BarA.
 
 
0.658
ALP43604.1
TorD family cytoplasmic chaperone.
 
     0.656
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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