STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP41862.1Multidrug ABC transporter permease. (373 aa)    
Predicted Functional Partners:
ALP40303.1
Membrane-fusion protein.
 
  
 0.956
ALP39652.1
Membrane protein.
 
   
 0.947
ALP42356.1
Multidrug ABC transporter permease.
 
    
0.854
nodI
ABC transporter-like protein.
 
  
 0.853
ALP42401.1
Secretion protein HlyD family protein.
 
  
 0.780
ALP42722.1
Transmembrane efflux pump.
 
  
 0.627
ydjA
Nitroreductase family protein.
  
  
 0.603
nfsA
Nitroreductase A; Belongs to the flavin oxidoreductase frp family.
  
  
 0.603
ALP41477.1
Hypothetical protein.
  
  
 0.596
yadG
Multidrug ABC transporter ATPase.
  
  
 0.558
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.