Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALP40581.1 | ALP41266.1 | WL1483_1162 | WL1483_1847 | Hypothetical protein. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.944 |
| ALP40581.1 | ALP43715.1 | WL1483_1162 | WL1483_4296 | Hypothetical protein. | sigma-E factor regulatory protein RseB. | 0.510 |
| ALP40581.1 | rseA | WL1483_1162 | WL1483_2622 | Hypothetical protein. | sigma-E factor negative regulatory protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic p [...] | 0.930 |
| ALP41263.1 | ALP41266.1 | WL1483_1844 | WL1483_1847 | DNA-directed RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.740 |
| ALP41263.1 | ALP43715.1 | WL1483_1844 | WL1483_4296 | DNA-directed RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. | sigma-E factor regulatory protein RseB. | 0.476 |
| ALP41263.1 | rpoE | WL1483_1844 | WL1483_1608 | DNA-directed RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.412 |
| ALP41263.1 | rseA | WL1483_1844 | WL1483_2622 | DNA-directed RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. | sigma-E factor negative regulatory protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic p [...] | 0.940 |
| ALP41266.1 | ALP40581.1 | WL1483_1847 | WL1483_1162 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.944 |
| ALP41266.1 | ALP41263.1 | WL1483_1847 | WL1483_1844 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. | 0.740 |
| ALP41266.1 | ALP43715.1 | WL1483_1847 | WL1483_4296 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | sigma-E factor regulatory protein RseB. | 0.466 |
| ALP41266.1 | rpoE | WL1483_1847 | WL1483_1608 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.401 |
| ALP41266.1 | rseA | WL1483_1847 | WL1483_2622 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | sigma-E factor negative regulatory protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic p [...] | 0.924 |
| ALP41666.1 | rseA | WL1483_2247 | WL1483_2622 | Hypothetical protein. | sigma-E factor negative regulatory protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic p [...] | 0.720 |
| ALP42710.1 | ALP43715.1 | WL1483_3291 | WL1483_4296 | sigma-E factor regulatory protein RseC. | sigma-E factor regulatory protein RseB. | 0.982 |
| ALP42710.1 | rpoE | WL1483_3291 | WL1483_1608 | sigma-E factor regulatory protein RseC. | RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.795 |
| ALP42710.1 | rseA | WL1483_3291 | WL1483_2622 | sigma-E factor regulatory protein RseC. | sigma-E factor negative regulatory protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic p [...] | 0.904 |
| ALP43715.1 | ALP40581.1 | WL1483_4296 | WL1483_1162 | sigma-E factor regulatory protein RseB. | Hypothetical protein. | 0.510 |
| ALP43715.1 | ALP41263.1 | WL1483_4296 | WL1483_1844 | sigma-E factor regulatory protein RseB. | DNA-directed RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. | 0.476 |
| ALP43715.1 | ALP41266.1 | WL1483_4296 | WL1483_1847 | sigma-E factor regulatory protein RseB. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.466 |
| ALP43715.1 | ALP42710.1 | WL1483_4296 | WL1483_3291 | sigma-E factor regulatory protein RseB. | sigma-E factor regulatory protein RseC. | 0.982 |
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