STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42086.1Msha pilin protein mshb. (156 aa)    
Predicted Functional Partners:
ALP41744.1
MSHA biogenesis protein MshA.
       0.757
epsE
Type IV pilin.
  
 
 0.729
ALP43262.1
GspF family protein.
  
  
 0.720
ALP43675.1
MSHA biogenesis protein MshN/MshD.
       0.643
ALP40560.1
MSHA biogenesis protein MshO.
       0.641
ALP42396.1
MSHA biogenesis protein MshP.
     
 0.638
ALP39612.1
MshQ protein.
       0.619
ALP41235.1
Type IV pilin.
  
 
 0.616
ALP41671.1
MSHA biogenesis protein MshC.
  
  
 0.616
exeJ
General secretion pathway protein J.
  
 
 0.616
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.