STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhDHypoxanthine oxidase. (958 aa)    
Predicted Functional Partners:
ygfM
Oxidoreductase.
 
 0.999
xdhB
Xanthine dehydrogenase subunit XdhB.
 
 0.996
ygfK
Selenate reductase subunit YgfK.
 
  
 0.994
xdhC
Xanthine dehydrogenase.
 
0.990
yqeB
Xanthine dehydrogenase accessory factor subfamily protein.
 
  
 0.950
xdhA
Xanthine dehydrogenase subunit XdhA.
 
 
0.932
ssnA
Chlorohydrolase/aminohydrolase.
 
  
 0.928
trxB
Thioredoxin reductase.
    
  0.901
cysD
Sulfate adenylyltransferase subunit 2.
     
  0.900
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
  0.900
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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