STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42128.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
ALP41112.1
ABC-type transporter periplasmic binding protein.
     0.990
ALP42858.1
Hypothetical protein.
 
    0.982
ALP42432.1
ABC transporter permease.
 
  
 0.954
ALP41489.1
ABC transporter permease.
 
     0.886
potA
Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily.
 
  
 0.849
ALP41710.1
Hypothetical protein.
       0.773
thiP
ABC-type thiamine transporter permease.
  
  
 0.699
ALP40213.1
iron(III) ABC transporter permease.
  
  
 0.699
ALP40575.1
GntR family transcriptional regulator.
 
     0.648
ALP40234.1
HAD-superfamily hydrolase.
 
     0.588
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.