Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALP40592.1 | ALP42349.1 | WL1483_1173 | WL1483_2930 | Hypothetical protein. | GGDEF domain-containing protein. | 0.536 |
| ALP40592.1 | ALP43427.1 | WL1483_1173 | WL1483_4008 | Hypothetical protein. | vWA domain-containing protein. | 0.536 |
| ALP40592.1 | ravA | WL1483_1173 | WL1483_1169 | Hypothetical protein. | ATPase. | 0.536 |
| ALP40592.1 | rimI | WL1483_1173 | WL1483_2719 | Hypothetical protein. | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.774 |
| ALP42349.1 | ALP40592.1 | WL1483_2930 | WL1483_1173 | GGDEF domain-containing protein. | Hypothetical protein. | 0.536 |
| ALP42349.1 | ALP43427.1 | WL1483_2930 | WL1483_4008 | GGDEF domain-containing protein. | vWA domain-containing protein. | 0.773 |
| ALP42349.1 | prfC | WL1483_2930 | WL1483_1202 | GGDEF domain-containing protein. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.477 |
| ALP42349.1 | ravA | WL1483_2930 | WL1483_1169 | GGDEF domain-containing protein. | ATPase. | 0.773 |
| ALP42349.1 | rimI | WL1483_2930 | WL1483_2719 | GGDEF domain-containing protein. | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.536 |
| ALP43427.1 | ALP40592.1 | WL1483_4008 | WL1483_1173 | vWA domain-containing protein. | Hypothetical protein. | 0.536 |
| ALP43427.1 | ALP42349.1 | WL1483_4008 | WL1483_2930 | vWA domain-containing protein. | GGDEF domain-containing protein. | 0.773 |
| ALP43427.1 | prfC | WL1483_4008 | WL1483_1202 | vWA domain-containing protein. | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.444 |
| ALP43427.1 | ravA | WL1483_4008 | WL1483_1169 | vWA domain-containing protein. | ATPase. | 0.967 |
| ALP43427.1 | rimI | WL1483_4008 | WL1483_2719 | vWA domain-containing protein. | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.536 |
| prfC | ALP42349.1 | WL1483_1202 | WL1483_2930 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | GGDEF domain-containing protein. | 0.477 |
| prfC | ALP43427.1 | WL1483_1202 | WL1483_4008 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | vWA domain-containing protein. | 0.444 |
| prfC | ravA | WL1483_1202 | WL1483_1169 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | ATPase. | 0.447 |
| prfC | rimI | WL1483_1202 | WL1483_2719 | Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.434 |
| ravA | ALP40592.1 | WL1483_1169 | WL1483_1173 | ATPase. | Hypothetical protein. | 0.536 |
| ravA | ALP42349.1 | WL1483_1169 | WL1483_2930 | ATPase. | GGDEF domain-containing protein. | 0.773 |
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