STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP39692.1Glycerophospholipid-cholesterol acyltransferase. (330 aa)    
Predicted Functional Partners:
ALP43623.1
Hypothetical protein.
  
     0.644
ALP42183.1
Hypothetical protein.
  
     0.640
ompA-3
Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
   0.521
ALP39846.1
Polymerase.
  
     0.520
ALP43638.1
Hypothetical protein.
  
     0.518
ALP41423.1
Hypothetical protein.
  
     0.500
ALP41571.1
OB-fold nucleic acid binding domain-containing protein.
       0.474
ALP40891.1
Collagenase family protein.
  
     0.471
ALP42019.1
Hypothetical protein.
  
    0.448
ALP41397.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.