Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ygaVNodulation protein NolR. (105 aa)    
Predicted Functional Partners:
ALP40034.1
YeeE/YedE protein.
 
     0.824
ALP42876.1
Putative transporter component.
 
     0.815
ALP41325.1
Hypothetical protein.
 
    0.652
ALP43748.1
AcrB/AcrD/AcrF family transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.608
ALP43157.1
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.603
copA
Copper-translocating P-type ATPase.
  
  
 0.519
ALP41901.1
RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.469
yvrO
Antimicrobial peptide ABC transporter ATPase.
       0.468
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.