STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42242.1Twin-arginine translocation pathway signal. (639 aa)    
Predicted Functional Partners:
puuC
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.916
prr
Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.916
ALP39705.1
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.908
ALP41327.1
SAM-dependent methyltransferase.
     
  0.900
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
  
 0.604
prpD
2-methylcitrate dehydratase.
  
  
 0.604
arnF
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase.
 
     0.579
davT
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.536
gltA
Type II citrate synthase; Belongs to the citrate synthase family.
  
  
 0.508
gltB
Glutamate synthase subunit alpha.
  
  
 0.497
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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