STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP39702.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
ALP40172.1
Hypothetical protein.
  
  
 0.942
ALP43586.1
AraC family transcriptional regulator.
  
  
 0.886
ALP39650.1
Hypothetical protein.
       0.795
ALP40035.1
Arylsulfatase.
       0.795
ALP41983.1
Hypothetical protein; Belongs to the UPF0276 family.
  
  
 0.754
ALP42616.1
Membrane protein.
  
  
 0.601
ALP40695.1
Membrane protein.
  
  
 0.519
yqjF
DoxX family protein.
  
  
 0.519
ALP40523.1
Toxin-antitoxin system, toxin component.
       0.513
cydB
Cytochrome BD oxidase subunit II.
       0.481
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.