STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP42283.1DNA transposition protein. (310 aa)    
Predicted Functional Partners:
ALP41345.1
DDE endonuclease.
 
 
 0.974
ALP41647.1
Sulfate transporter.
 
    0.923
ALP41577.1
Integrase.
 
 
 0.891
ALP40257.1
Hypothetical protein.
 
    0.835
sfsB
Winged helix-turn-helix DNA-binding family protein.
 
   
 0.826
ALP42603.1
Hypothetical protein.
 
    0.795
ALP42906.1
Hypothetical protein.
    
   0.782
ALP42742.1
Hypothetical protein.
       0.773
ALP43193.1
Hypothetical protein.
       0.773
ALP40665.1
Phage baseplate protein.
  
     0.766
Your Current Organism:
Aeromonas schubertii
NCBI taxonomy Id: 652
Other names: A. schubertii, ATCC 43700, Aeromonas hybridization group 12, CCUG 27820, CDC 2446-81, CECT 4240, CIP 103437, DSM 4882, Enteric Group 501, JCM 7373, LMG 9074, LMG:9074
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.